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CLINICAL STUDY |
ka Límanová2Department of Paediatrics, 3rd Faculty of Medicine, Charles University, Prague, Czech Republic, 1 Institute of Experimental Paediatric Endocrinology, University Childrens Hospital Charité, Berlin, Germany, 2 3rd Medical Clinic, 1st Faculty of Medicine, Charles University, Prague, Czech Republic, 3 Department of Neonatology, Campus Virchow-Klinikum, University Childrens Hospital Charité, Berlin, Germany and 4 Department of Paediatrics, 2nd Faculty of Medicine, Charles University, Prague, Czech Republic
(Correspondence should be addressed to E Al Taji; Email: evataji{at}seznam.cz)
| Abstract |
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Design: In a phenotype-selected cohort of 170 Czech paediatric and adolescent patients with non-goitre CH, including thyroid dysgenesis, or non-goitre early-onset hypothyroidism, PAX8, NKX2.1, NKX2.5, FOXE1 and HHEX genes were analysed for mutations.
Methods: NKX2.1, NKX2.5, FOXE1 and HHEX genes were directly sequenced in patients with syndromic CH. PAX8 mutational screening was performed in all 170 patients by single-stranded conformation polymorphism, followed by direct sequencing of samples with abnormal findings. The R52P PAX8 mutation was functionally characterized by DNA binding studies.
Results: We identified a novel PAX8 mutation R52P, dominantly inherited in a three-generation pedigree and leading to non-congenital, early-onset, non-goitre, non-autoimmune hypothyroidism with gradual postnatal regression of the thyroid size and function. The R52P PAX8 mutation results in the substitution of a highly conserved residue of the DNA-binding domain with a loss-of-function effect. Conclusions: The very low frequency of genetic defects in a population-based cohort of children affected by non-goitre congenital and early-onset hypothyroidism, even in a phenotype-focussed screening study, suggests the pathogenetic role of either non-classic genetic mechanisms or the involvement of genes unknown so far. Identification of a novel PAX8 mutation in a particular variant of non-congenital early-onset hypothyroidism indicates a key function of PAX8 in the postnatal growth and functional maintenance of the thyroid gland.
| Introduction |
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Based on the phenotype of the knock-out mice, mutations of FOXE1 (1517) and NKX2.1 (18) were identified in several patients with syndromic forms of CH. While patients with FOXE1 mutations are affected by cleft palate in addition to TD (BamforthLazarus syndrome (19), OMIM 241850 [OMIM] ), patients with NKX2.1 mutations suffer from choreoathetosis. Mutations of FOXE1 (OMIM 602617 [OMIM] ) and NKX2.1 (OMIM 600635 [OMIM] ) in non-syndromic CH have not been reported yet (e.g. (20)). More recently, mutations in NKX2.5 (OMIM 600584 [OMIM] ), that is expressed both in the developing thyroid and heart (21) and which was found to be mutated in various congenital heart defects (e.g. (22)), were described in four patients with CH and TD, of whom one was also affected by heart defect (23). Most mutations in patients with TD were found in the PAX8 gene (OMIM 167415 [OMIM] ) so far with some familial dominant or sporadic cases of mainly non-syndromic, non-goitre CH (2431). Although PAX8 is also expressed during renal development, knock-out mice do not manifest an overt kidney phenotype and an additional renal malformation has been described only in two patients (28, 31). Mutations in the human HHEX gene (OMIM 604420 [OMIM] ) have not yet been identified.
Taken together, these data imply that some genetic defects in transcription factors expressed during early steps of thyroid development can be present in a given cohort of patients with TD, besides the majority of cases with a non-Mendelian genetic defect. To describe the incidence of these mutations, especially in the case of thyroid transcription factors within a population-based context, we have screened a cohort of 170 patients mostly diagnosed by the Czech nationwide neonatal screening for CH. The screening was focussed on those phenotypes that had been described previously in other large studies investigating each candidate gene separately. In our phenotype-based mutation screening, we investigated PAX8 in all patients with non-goitre congenital or early-onset hypothyroidism, as well as NKX2.1, NKX2.5, FOXE1 and HHEX in several particular patients with CH and associated malformations. We have identified a novel loss-of-function mutation of the PAX8 gene (R52P) causing non-congenital early-onset hypothyroidism dominantly inherited in three generations of one family.
| Patients and methods |
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One hundred and seventy Czech Caucasian paediatric and adolescent patients with permanent primary non-autoimmune, non-goitre hypothyroidism diagnosed in infancy or early childhood were included in this study. One hundred and sixty-three probands were identified within the frame of the Czech nationwide neonatal screening programme for CH during the period from 1985 to 2002 (the assessment of total thyroxine (tT4) by RIA during 19851995, since 1996 TSH levels measured by DELPHIA on dry blood spots from a heel prick, TSH cut-off 15 mIU/l). Except for six children with compensated hypothyroidism, all the cases were characterized by high TSH and low fT4 and/or tT4 levels. Five patients were born before routine neonatal screening for CH was established. Two patients had negative screening results but developed early-onset, non-goitre hypothyroidism. With regard to the thyroid morphology determined before the initiation of T4 treatment, the cohort was composed as shown in Table 1
. The classification is primarily based on ultrasound studies, since 99Tc scintigraphy was provided only for a small number of patients in the early phase of the screening programme.
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| Methods |
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Gene analysis was performed with genomic DNA extracted from leukocytes taken from peripheral blood using a modified salting out method (32).
PCR conditions
PCR were performed using the Expand High Fidelity PCR System (Roche Diagnostics). PCRs were run in a Gene Amp PCR system 9700 cycler (PE Applied Biosystems, Foster City, CA, USA). Negative controls were always included. PCR products mixed with a loading dye were run on a 11.5% agarose gel (Ultra Pure Agarose Gel, Life Technologies) stained with ethidium bromide and visualized under u.v. light (all primers and PCR conditions are available upon request).
Direct sequencing
For direct sequencing, PCR products were purified with the QIAquick PCR Purification Kit (Qiagen). Sequencing reactions were prepared using appropriate primers and the DNA sequencing kit BigDye Terminator Ready Reaction Cycle Sequencing Kit (PE Applied Biosystems, Warrington, UK) in a 10 µl volume under standard conditions. Sequencing was performed in both directions on an ABI PRISM 377 sequencer (PE Applied Biosystems). Sequence variations were nomenclatured and numbered according to Ref. (33).
Single-stranded conformation polymorphism (SSCP)
Two microlitres of PCR product were mixed with a 14 µl formamide stop solution (95% formamide, 10 mM NaOH, 0.1% bromophenol blue, 0.1% xylene cyanol, 10% DMSO), denatured for 5 min and immediately cooled on ice. PCR products were loaded onto a denaturating formamide gel (2.5 ml 95% formamide, 2.5 ml 2x MDE, 250 µl 10x TBE, 15 µl TEMED, 80 µl 10% APS) and run on a non-denaturating 1x MDE gel (1.75 ml 10x TBE, 17.5 ml 2x MDE, 14 µl TEMED, 140 µl 10% APS, 16 ml H2O) using mutation detection enhancement gel solution (BioWhittaker Molecular Applications, Rockland, ME, USA). Electrophoresis was performed in 0.5xTBE at 2 W constant power at room temperature for 2030 h and at 4 °C for 5060 h. SSCP bands were detected with the silver staining method using 0.1% silver nitrate according to the standardized protocol, and gels were dried in vacuum. Samples showing an abnormal mobility pattern within the matrix when compared with the wild-type control were submitted to direct sequencing.
Synthesis of wild-type PAX8 and mutant PAX8 R52P proteins
For functional characterization, human PAX8 cDNA was cloned into the ClaI and EcoRI cloning sites of the pCS2+ expression vector (constructed by Dave Turner). Mutant R52P PAX8 was obtained by standard muta-genesis procedure. Wild-type and mutant proteins for shift assay were generated using the in vitro cell-free transcription/translation (TnT system, Promega).
Electrophoretic mobility shift assay (EMSA)
EMSA was prepared as described previously (34). Four micrograms of human wild-type PAX8 or mutant PAX8 R52P proteins were incubated with 1 µg BSA, 0.1 µg herring sperm DNA and 0.5 µg poly[dI-dC] in the binding buffer (10 mmol/l TrisHCl pH 7.5, 1 mmol/l EDTA, 4% Ficoll 1 mmol/l dithiothreitol and 2 mmol/l phenylmethylsulphonyl fluoride). In the competition experiment, an 800-fold excess of cold wild-type competitor was added. Reactions were incubated for 20 min at 30 °C. Then, 100 fmol of an end-radiolabelled 24 bp double-stranded oligonucleotide containing the rat PAX8 binding site, located at 72 nt to 66 nt relative to the transcription start site of the thyroglobulin gene (35), was been added to the reaction and incubated for an additional 45 min at 30 °C. Immediately after incubation, samples were loaded onto a 5% polyacrylamide gel in 0.5x TBE buffer (pH 8.3). Electrophoresis was performed at 34 mA at 4 °C for ~2.5 h. After drying of the gel, complex formation was visualized by overnight autoradiography. The following double-stranded oligonucleotide was used in the experiment: 5'-CACTGCCCAGTCAAGTGTTCTTGA-3' (only the non-coding strand is shown and the consensus PAX8 binding site is underlined; National Center for Biotechnology Information (NCBI) accession no. X06162 [GenBank] ; (29)).
| Results |
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NKX2.5, NKX2.1, FOXE1 and HHEX genes
Fifteen patients with heart defects were investigated for NKX2.5 mutations. A male patient with CH due to TD (eutopic hypoplastic thyroid gland), associated with neonatal respiratory distress and perinatal asphyxia, severe neurological impairment (central muscular hypotony, movement disorder, paroxysms, psychomotor retardation) and congenital hydronephrosis, was analysed for NKX2.1 mutations. A female patient with CH due to TD (eutopic hypoplastic thyroid gland), associated with multiple congenital anomalies including cleft palate and severe psychomotor retardation, was tested for FOXE1. One female patient with mild forms of cerebral (cavum septum pellucidum) and thyroid dysgenesis (mild hypoplasia) was investigated for HHEX mutations, since the complex phenotype of the Hhex/ mouse includes a brain midline structure defect in addition to TD.
No significant sequence variations were observed in all four genes. Among the 15 patients with CH and associated congenital cardiac malformations, two known sequence variations of the NKX2.5 gene were found: c.63A>G (p.E21E) in seven heterozygotes and one homozygote, and c.*61T>G in eight heterozygotes and four homozygotes. Direct sequencing of FOXE1 revealed the heterozygous polymorphisms c.819 C>T (p.S273S) and c.510C>A (p.A170A) in a 14 residue alanine stretch.
PAX8 gene
Based on the thyroid phenotype described so far in PAX8 mutation carriers, we screened all patients with CH due to TD for mutations in the PAX8 gene as well as all patients with congenital or early-onset non-goitre hypothyroidism, including familial cases with dominant inheritance. Exon 2 with the ATG initiation codon and exons 34 encoding for the DNA-binding paired domain were screened by SSCP in all 170 individuals. In 34 of these, suffering either from renal malformations or with positive family history, all coding exons 212 were screened by SSCP. In addition, exons 34 have also been sequenced.
In a boy with unsuspicious neonatal screening for CH but early postnatal regression of the thyroid size and function, we identified a novel heterozygous missense mutation in exon 3. The mutation changes a G in position 155 into a C (numbering starts with the adenine nucleotide at the ATG initiation codon in exon 2; Fig. 2B
), leading to an amino acid exchange of a highly conserved arginine to proline at codon 52 (R52P) in the DNA-binding domain of PAX8. The same mutation was detected in his hypothyroid mother and maternal grandmother, both treated for early-onset, non-autoimmune hypothyroidism. Neither siblings of mother nor maternal great grandmother carried the mutation. The mutation has not been documented in any of 100 chromosomes of 50 subjects randomly selected from Czech Caucasian non-CH paediatric patients.
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The index patient was born at term (birth weight 3500 g, length 51 cm) as the first son and only child of non-consanguineous parents after an apparently normal pregnancy (mother was treated with combined T4 and T3 substitution for non-autoimmune permanent hypothyroidism) in 1999. Neonatal screening for CH was negative (TSH 9.49 mIU/l, cut-off 15 mIU/l), and therefore no further detailed thyroid functional data are available. The diagnosis of hypothyroidism was established when he was still asymptomatic at the age of 18 months due to the positive family history of non-autoimmune permanent hypothyroidism in his mother and grandmother. TSH was remarkably elevated (183.9 mIU/l, normal range 0.255 mIU/l), fT4 and fT3 were low (fT4 7.19 pmol/l, normal range 1026 pmol/l, fT3 3.32 pmol/l, normal range 4.28.1 pmol/l). His body length was 87 cm. Ultrasound examination showed a eutopic thyroid gland of a normal structure but at a lower end of a normal size (total volume 1 ml, own normative data for this age 1.39 ± 0.31 ml). Subsequently, under T4 substitution, the thyroid gland did not grow properly and even got reduced in its size. The tissue structure changed into the hyperechogenic fibrous rudiment (total volume 0.45 ml in 3 years, own normative data 1.82 ± 0.53 ml) (Fig. 2C
). At the age of 3 years, blood samples taken after 4 weeks of the withdrawal of treatment confirmed permanent hypothyroidism (TSH 100 mIU/l, fT4 4.74 pmol/l) with low thyroglobulin levels, relative to elevated TSH (5733 µg/l, normal range 3085 µg/l). His psychomotor and physical development is normal. His mother, born in 1974 before the initiation of screening programme for CH, was diagnosed at the age of 6 months due to the diagnosis of permanent hypothyroidism of her mother, born in 1953 and diagnosed at the age of 3 years because of her short stature and obesity. No thyroid imaging study was performed prior to treatment, but recent ultrasound examinations showed a eutopic rudimental thyroid gland in mother and grandmother. Antithyroid antibodies were not detectable in all the three carriers of the PAX8 R52P mutation. There were no detectable abnormalities of the structure or function of the kidneys.
| Discussion |
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However, despite the fact that we focussed the analysis of NKX2.5, NKX2.1 and FOXE1 genes on TD patients with associated malformations or complications that have been previously reported, such as movement defects (NKX2.1), heart defects (NKX2.5) or cleft palate (FOXE1), we did not find any mutations in these particular subgroups of patients. Our data confirm that the mutation rate of the three candidate genes NKX2.1, NKX2.5 and FOXE1 is very low, even in a phenotype-focussed study. Other mechanisms, such as epigenetic or somatic changes that are not inherited, could cause the inactivation of these three respective candidate genes. Alternatively, unknown genes, functionally similar to NKX2.1, NKX2.5 and FOXE1, might be involved in the pathogenesis of these particular cases with associated malformations.
Searching for PAX8 gene mutations in this large cohort of 170 Czech patients revealed only one novel loss-of-function mutation leading to non-congenital, non-autoimmune but early-onset hypothyroidism dominantly inherited in three generations (Fig. 2
). All the three affected members of the index family were diagnosed as heterozygous carriers of a novel R52P mutation in the DNA-binding paired domain (Fig. 4C and D
). The PAX8 paired domain is a 128 amino acid DNA-binding domain highly conserved in the human PAX protein family, showing sequence similarity to the Drosophila paired protein (36). It consists of two structurally independent subdomains, each containing a helix-turn-helix motif joined by a linker region ((37); Fig. 4D
). Except for two mutations (24, 29), all PAX8 mutations published so far (2428, 30) are located within the N-terminal subdomain (Fig. 4C and D
). At the structural level, these mutations affect either residues directly contacting DNA at the proteinDNA interface or residues involved in the folding and stability of the protein. At the functional level, most of the heterozygous mutations located in the N-terminal subdomain are known to reduce binding affinity to a specific DNA sequence (24, 25, 27, 28).
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-helix (37). It interacts with the loop between two strands of the ß-sheet and stabilizes the docking of the ß-turn together with other proteinprotein and proteinDNA contacts, making a critical base that allows contacts in the minor groove of the DNA (37). Taken together, these structural and evolutional considerations suggest that the R52P mutation leads to the loss of DNA binding, confirmed by our DNA binding studies (Fig. 3The phenotypical expression of the R52P PAX8 mutation seems to be unique, because the index patient was shown to be normal in the newborn screening for CH, but later on at the age of 18 months diagnosed with severe hypothyroidism. Obviously, the R52P mutation carrier, identified in our study, would have been missed in all other cohorts screened so far for PAX8 gene mutations and focussed solely on CH patients identified in screening programmes. However, the mild phenotype in the index patient of one previously described familial case of PAX8 gene mutation (24), characterized by a borderline elevated screening TSH and normal T4 in the newborn period but aggravating hypothyroidism during the first month of life, resembles the findings in our R52P mutation index case. Taken together, the findings in the R52P mutation carriers in our study and the familial case presented before (24) argue that PAX8 might not only play a role during early thyroid organogenesis, but also participate in the postnatal maintenance of thyroid function. Thus, our findings suggest that even if the results of neonatal screening for CH are negative and thyroid gland is correctly developed and apparently normal, PAX8 gene deficiency can cause hypothyroidism in the early postnatal life due to the gradual growth and functional impairment. Therefore, the search for PAX8 gene mutations might be extended to those rare patients with early-onset hypothyroidism who were negative in CH screening.
The exact molecular mechanism responsible for the insufficient postnatal growth and functional regression of the thyroid gland in PAX8 deficiency is still unclear. However, Pax8 is essential for the formation of thyroid follicular structures (13) and has a fundamental role in the initiation of the thyroid cell differentiation and in the maintenance of the differentiated state (38). Thereby, PAX8 deficiency may also result in postnatal dysregulation of the proliferation of thyroid cells and follicles or alternatively in a reduced survival due to an increased apoptotic degradation of thyroid follicular structures. Thus, identification of the new R52P PAX8 mutation leading to a hitherto undescribed dominantly inherited form of hypothyroidism with an early non-congenital and non-autoimmune onset implies an additional role of PAX8 in the postnatal maintenance of thyroid function.
Overall, our study confirms the very low prevalence of mutations in the known thyroid transcription factor genes in TD. Taking into account the rare occurrence of TSH-receptor gene mutations described earlier, it seems obvious that even the search in a phenotype-focussed strategy will not reveal a significant number of additional genetic defects in the known candidate genes for TD. More efforts to identify non-classical genetic defects like an epigenetic silencing of critical candidate genes in TD are mandatory to unravel the pathogenesis of TD.
| Acknowledgements |
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tová, J Klabochová, E Nováková, D Novotná, R Pomaha
ová, J
kvor, H Vávrová, J Venhá
ová and J Zapletalová).
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